Organism Overview: Campbellbacteria bacterium RIFCSPLOWO2023512


 
A2Z61_00010 protein networkhttps://string-db.org/network/1797580.A2Z61_00010Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67731.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00015Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
tsaD protein networkhttps://string-db.org/network/1797580.A2Z61_00020Hypothetical protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer o [...]
OGD67733.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00030Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DNA glycosylase MPG family.
OGD67735.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00040Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl- [...]
rpsM protein networkhttps://string-db.org/network/1797580.A2Z61_0004530S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 [...]
rpsK protein networkhttps://string-db.org/network/1797580.A2Z61_0005030S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belon [...]
rpsD protein networkhttps://string-db.org/network/1797580.A2Z61_0005530S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
rpoA protein networkhttps://string-db.org/network/1797580.A2Z61_00060DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
rplQ protein networkhttps://string-db.org/network/1797580.A2Z61_0006550S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGD67740.1 protein networkhttps://string-db.org/network/1797580.A2Z61_0007050S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages [...]
OGD67746.1 protein networkhttps://string-db.org/network/1797580.A2Z61_0007530S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS9 family.
grpE protein networkhttps://string-db.org/network/1797580.A2Z61_00080Nucleotide exchange factor GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE [...]
dnaK protein networkhttps://string-db.org/network/1797580.A2Z61_00085Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
OGD66214.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00095Hypothetical protein; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange react [...]
OGD66215.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00100Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the MurCDEF family. MurE subfamily.
OGD66216.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00105Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66217.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00110Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGD66218.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00115Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66219.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00120Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGD66724.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00135Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
murB protein networkhttps://string-db.org/network/1797580.A2Z61_00140UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
OGD66726.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00145Preprotein translocase subunit SecA; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the SecA family.
A2Z61_00155 protein networkhttps://string-db.org/network/1797580.A2Z61_00155Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the pepti [...]
OGD66574.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00160Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66575.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00165Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66576.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00170Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
A2Z61_00180 protein networkhttps://string-db.org/network/1797580.A2Z61_00180Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66970.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00185Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66636.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00195Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
tgt protein networkhttps://string-db.org/network/1797580.A2Z61_00200tRNA-guanine(34) transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) [...]
OGD66635.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00205Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abn [...]
OGD66542.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00215Hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.
OGD66547.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00220Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGD66543.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00225Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66544.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00230Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66545.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00235Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66546.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00240Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66432.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00250Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the sigma-70 factor family. ECF subfamily.
OGD66433.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00255Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
recA protein networkhttps://string-db.org/network/1797580.A2Z61_00260Recombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of [...]
OGD66435.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00265Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66436.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00270Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the FtsK/SpoIIIE/SftA family.
OGD66437.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00275Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
A2Z61_00290 protein networkhttps://string-db.org/network/1797580.A2Z61_00290Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66440.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00295Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66441.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00300Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
rplJ protein networkhttps://string-db.org/network/1797580.A2Z61_0030550S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal prot [...]
A2Z61_00315 protein networkhttps://string-db.org/network/1797580.A2Z61_0031550S ribosomal protein L7/L12; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGD67533.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00320Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67534.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00325Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67535.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00330Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGD67536.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00335Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67537.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00340Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
rplY protein networkhttps://string-db.org/network/1797580.A2Z61_00350Hypothetical protein; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. [...]
OGD66466.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00355Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
OGD66467.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00360Tagatose-bisphosphate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGD66468.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00365Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66469.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00370Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66470.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00375Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66471.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00380Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGD66472.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00385Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGD66473.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00390Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66474.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00395Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGD66475.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00400Type I glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glyceraldehyde-3-phosphate dehydrogenas [...]
OGD66476.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00405Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGD66477.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00410Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGD66478.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00415Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
cysS protein networkhttps://string-db.org/network/1797580.A2Z61_00420cysteine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family.
OGD67192.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00425Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67193.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00430Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the peptidase S41A family.
rplI protein networkhttps://string-db.org/network/1797580.A2Z61_0043550S ribosomal protein L9; Binds to the 23S rRNA.
OGD67195.1 protein networkhttps://string-db.org/network/1797580.A2Z61_0044050S ribosomal protein L27; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGD67196.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00445Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67197.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00450Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
A2Z61_00460 protein networkhttps://string-db.org/network/1797580.A2Z61_00460Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67199.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00465Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67200.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00470Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67201.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00475Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66706.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00480Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66716.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00485Ribonucleoside-triphosphate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGD66707.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00495Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66708.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00500Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
lepA protein networkhttps://string-db.org/network/1797580.A2Z61_00505Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon bac [...]
OGD66710.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00510Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66711.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00520Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGD66712.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00530Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66713.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00535Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66714.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00540Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGD66715.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00545Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
A2Z61_00580 protein networkhttps://string-db.org/network/1797580.A2Z61_00580Hypothetical protein; Metagenomic; derived from metagenome: subsurface metagenome.
OGD66185.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00585Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
ftsH protein networkhttps://string-db.org/network/1797580.A2Z61_00595Cell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins [...]
smpB protein networkhttps://string-db.org/network/1797580.A2Z61_00600SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tm [...]
OGD66187.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00610Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enha [...]
OGD66188.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00615Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
rplT protein networkhttps://string-db.org/network/1797580.A2Z61_0062050S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing func [...]
OGD66190.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00625Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
A2Z61_00635 protein networkhttps://string-db.org/network/1797580.A2Z61_00635Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67364.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00640Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67365.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00645Hypothetical protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs [...]
dnaX protein networkhttps://string-db.org/network/1797580.A2Z61_00650DNA polymerase III, subunit gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' t [...]
OGD67367.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00660Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66866.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00670Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGD66867.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00675Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66868.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00680Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66869.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00685Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGD66870.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00690single-stranded-DNA-specific exonuclease RecJ; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66871.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00695Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
uvrA protein networkhttps://string-db.org/network/1797580.A2Z61_00705ABC-ATPase UvrA; Metagenomic; derived from metagenome: subsurface metagenome.
OGD66604.1 protein networkhttps://string-db.org/network/1797580.A2Z61_0071050S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the t [...]
rplR protein networkhttps://string-db.org/network/1797580.A2Z61_0071550S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protubera [...]
OGD66621.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00720Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS5 family.
rplO protein networkhttps://string-db.org/network/1797580.A2Z61_0072550S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.
secY protein networkhttps://string-db.org/network/1797580.A2Z61_00730Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at t [...]
OGD66608.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00735Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
map protein networkhttps://string-db.org/network/1797580.A2Z61_00740Type I methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and u [...]
OGD66610.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00745Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66611.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00750Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66622.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00755Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGD66612.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00760Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66613.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00765glycine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGD66614.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00770Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66615.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00775methionine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family.
OGD66616.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00780Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66617.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00785Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66618.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00790Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66623.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00795Single-stranded DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
rpsR protein networkhttps://string-db.org/network/1797580.A2Z61_0080030S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosom [...]
OGD66620.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00805Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
A2Z61_00810 protein networkhttps://string-db.org/network/1797580.A2Z61_00810Hypothetical protein; Metagenomic; derived from metagenome: subsurface metagenome.
OGD67504.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00815Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67505.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00820Conjugal transfer protein TraC; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67506.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00825Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67507.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00830Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67508.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00835Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67509.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00840Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67510.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00845Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67511.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00850Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGD67512.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00855Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67513.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00860Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67514.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00865Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67515.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00870Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67516.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00875Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
ppa protein networkhttps://string-db.org/network/1797580.A2Z61_00880Hypothetical protein; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
OGD66652.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00885Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66653.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00890Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
A2Z61_00900 protein networkhttps://string-db.org/network/1797580.A2Z61_00900Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
rsmA protein networkhttps://string-db.org/network/1797580.A2Z61_00905Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S part [...]
OGD66656.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00910Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66657.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00915Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
A2Z61_00920 protein networkhttps://string-db.org/network/1797580.A2Z61_00920Hypothetical protein; Metagenomic; derived from metagenome: subsurface metagenome.
murA protein networkhttps://string-db.org/network/1797580.A2Z61_00925UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
OGD66926.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00930Rod shape-determining protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGD66927.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00935Zinc metalloprotease HtpX; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67025.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00945Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67026.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00950Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67027.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00955Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67028.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00960Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67029.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00965Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67030.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00970Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGD67031.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00975Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGD67032.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00980Type IV pili twitching motility protein PilT; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGD67033.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00985Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67034.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00990Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67035.1 protein networkhttps://string-db.org/network/1797580.A2Z61_00995Hypothetical protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
OGD67036.1 protein networkhttps://string-db.org/network/1797580.A2Z61_0100050S ribosomal protein L32; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
nusB protein networkhttps://string-db.org/network/1797580.A2Z61_01005Transcription antitermination factor NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator seque [...]
rnc protein networkhttps://string-db.org/network/1797580.A2Z61_01010Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some m [...]
OGD67039.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01015Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67040.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01020Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67041.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01025Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67042.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01030phenylalanine--tRNA ligase subunit alpha; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67043.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01035Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67044.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01040Negatively supercoils closed circular double-stranded DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGD67045.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01045Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
A2Z61_01065 protein networkhttps://string-db.org/network/1797580.A2Z61_01065Hypothetical protein; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for [...]
A2Z61_01080 protein networkhttps://string-db.org/network/1797580.A2Z61_01080Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66261.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01085Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
topA protein networkhttps://string-db.org/network/1797580.A2Z61_01090DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of [...]
OGD66263.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01095Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66264.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01100Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ParB family.
OGD66265.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01110Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66279.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01115Peroxiredoxin; With AhpF catalyzes the conversion of alkyl hydroperoxides to their corresponding alcohols; AhpC reduced the hydroperoxide substrate; Derived by automated computational analysis us [...]
miaA protein networkhttps://string-db.org/network/1797580.A2Z61_01120tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to [...]
rpmG protein networkhttps://string-db.org/network/1797580.A2Z61_0113050S ribosomal protein L33; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL33 family.
OGD66268.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01135Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66269.1 protein networkhttps://string-db.org/network/1797580.A2Z61_0114030S ribosomal protein S16; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66270.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01145Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66271.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01150Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
rnr protein networkhttps://string-db.org/network/1797580.A2Z61_01155Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.
OGD66273.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01160Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66274.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01165Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
hisS protein networkhttps://string-db.org/network/1797580.A2Z61_01170histidine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGD66276.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01175Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66277.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01180Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66278.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01185Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66280.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01190Kinase inhibitor; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGD66294.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01195Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66295.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01200Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66297.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01210Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family.
murG protein networkhttps://string-db.org/network/1797580.A2Z61_01215Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide [...]
OGD66299.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01220Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
gltX protein networkhttps://string-db.org/network/1797580.A2Z61_01225Hypothetical protein; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of t [...]
OGD66301.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01230Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66302.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01235Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66303.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01240Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67377.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01255DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
dnaG protein networkhttps://string-db.org/network/1797580.A2Z61_01260DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
OGD67379.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01265Hypothetical protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
A2Z61_01275 protein networkhttps://string-db.org/network/1797580.A2Z61_01275Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67085.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01280Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67086.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01285Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGD67087.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01290Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
ftsZ protein networkhttps://string-db.org/network/1797580.A2Z61_01295Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the tim [...]
ftsA protein networkhttps://string-db.org/network/1797580.A2Z61_01300Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring.
ybeY protein networkhttps://string-db.org/network/1797580.A2Z61_01305rRNA maturation RNase YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
OGD67091.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01310Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
A2Z61_01315 protein networkhttps://string-db.org/network/1797580.A2Z61_01315Magnesium chelatase; Metagenomic; derived from metagenome: subsurface metagenome.
OGD66830.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01320Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66831.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01325Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
A2Z61_01340 protein networkhttps://string-db.org/network/1797580.A2Z61_01340Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67584.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01345Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67585.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01350Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67586.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01355Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67587.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01360Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67588.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01365Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
rplE protein networkhttps://string-db.org/network/1797580.A2Z61_0137050S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance [...]
rplX protein networkhttps://string-db.org/network/1797580.A2Z61_0137550S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.
rplN protein networkhttps://string-db.org/network/1797580.A2Z61_0138050S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
rpsQ protein networkhttps://string-db.org/network/1797580.A2Z61_0138530S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
OGD67593.1 protein networkhttps://string-db.org/network/1797580.A2Z61_0139050S ribosomal protein L29; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67594.1 protein networkhttps://string-db.org/network/1797580.A2Z61_0139550S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.
rpsC protein networkhttps://string-db.org/network/1797580.A2Z61_0140030S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.
rplV protein networkhttps://string-db.org/network/1797580.A2Z61_0140550S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wal [...]
rpsS protein networkhttps://string-db.org/network/1797580.A2Z61_0141030S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
OGD67598.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01415Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67599.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01420Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67600.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01425Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67601.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01430Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
rplB protein networkhttps://string-db.org/network/1797580.A2Z61_0143550S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It [...]
rplW protein networkhttps://string-db.org/network/1797580.A2Z61_0144050S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main dock [...]
rplD protein networkhttps://string-db.org/network/1797580.A2Z61_0144550S ribosomal protein L4; Forms part of the polypeptide exit tunnel.
rplC protein networkhttps://string-db.org/network/1797580.A2Z61_0145050S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal rib [...]
rpsJ protein networkhttps://string-db.org/network/1797580.A2Z61_0145530S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
tuf protein networkhttps://string-db.org/network/1797580.A2Z61_01460Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
fusA protein networkhttps://string-db.org/network/1797580.A2Z61_01465Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) [...]
rpsG protein networkhttps://string-db.org/network/1797580.A2Z61_0147030S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit inte [...]
rpsL protein networkhttps://string-db.org/network/1797580.A2Z61_0147530S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S an [...]
rpoB protein networkhttps://string-db.org/network/1797580.A2Z61_01485Hypothetical protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
OGD67852.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01490Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGD67845.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01495DNA methylase N-4; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the N(4)/N(6)-methyltransferase family.
OGD67846.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01500Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67847.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01505Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67849.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01515Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67850.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01520Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67216.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01525DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
ileS protein networkhttps://string-db.org/network/1797580.A2Z61_01530Hypothetical protein; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors [...]
argS protein networkhttps://string-db.org/network/1797580.A2Z61_01535arginine--tRNA ligase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67219.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01540Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
dcd protein networkhttps://string-db.org/network/1797580.A2Z61_01545dCTP deaminase; Bifunctional enzyme that catalyzes both the deamination of dCTP to dUTP and the hydrolysis of dUTP to dUMP without releasing the toxic dUTP intermediate.
rplK protein networkhttps://string-db.org/network/1797580.A2Z61_0155050S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
nusG protein networkhttps://string-db.org/network/1797580.A2Z61_01555Transcription termination/antitermination protein NusG; Participates in transcription elongation, termination and antitermination.
secE protein networkhttps://string-db.org/network/1797580.A2Z61_01560Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
OGD67224.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01565Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
A2Z61_01575 protein networkhttps://string-db.org/network/1797580.A2Z61_01575tRNA-Cys; Metagenomic; derived from metagenome: subsurface metagenome.
OGD67788.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01580Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to [...]
OGD67789.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01585Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67790.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01590Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGD67791.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01595Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67792.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01600ATP-dependent chaperone ClpB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ClpA/ClpB family.
OGD66141.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01620Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66142.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01625Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66143.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01630Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66144.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01635Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66145.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01640Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66146.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01645Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
gyrA protein networkhttps://string-db.org/network/1797580.A2Z61_01650DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in a [...]
OGD66148.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01655Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66149.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01660Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66506.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01665Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
tsf protein networkhttps://string-db.org/network/1797580.A2Z61_01670Hypothetical protein; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the [...]
rpsB protein networkhttps://string-db.org/network/1797580.A2Z61_0167530S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS2 family.
OGD66509.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01680Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGD66510.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01685Peptide chain release factor 1; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
rpmE protein networkhttps://string-db.org/network/1797580.A2Z61_0169050S ribosomal protein L31; Binds the 23S rRNA.
OGD66512.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01695Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66663.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01710Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66664.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01715valine--tRNA ligase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66665.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01720Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66666.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01725Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the small heat shock protein (HSP20) family.
OGD67776.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01735Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67777.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01740Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD67778.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01745Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
rsmH protein networkhttps://string-db.org/network/1797580.A2Z61_0175016S rRNA (cytosine(1402)-N(4))-methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
mraZ protein networkhttps://string-db.org/network/1797580.A2Z61_01755Cell division/cell wall cluster transcriptional repressor MraZ; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MraZ family.
lysS protein networkhttps://string-db.org/network/1797580.A2Z61_01760lysine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II aminoacyl-tRNA synthetase family.
A2Z61_01770 protein networkhttps://string-db.org/network/1797580.A2Z61_01770Hypothetical protein; Too many ambiguous residues; incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: Ge [...]
OGD66978.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01785Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins; Belongs to the polypeptide deformylase family.
OGD66979.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01790methionyl-tRNA formyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
OGD66980.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01795Ribosomal subunit interface protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
OGD66981.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01800Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0235 family.
OGD66982.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01805Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the helicase family. UvrD subfamily.
OGD66983.1 protein networkhttps://string-db.org/network/1797580.A2Z61_01810Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.